General Information of Natural Product (ID: NP0436)
  Natural Product Name
Cis-2-Penten-1-Ol
  Synonyms
cis-2-Penten-1-ol; 1576-95-0; (Z)-Pent-2-en-1-ol; (Z)-2-Penten-1-ol; 2-Penten-1-ol, (Z)-; cis-Pent-2-ene-1-ol; cis-Pent-2-en-1-ol; UNII-QNC2NB53MJ; (2Z)-2-Penten-1-ol; (Z)-2-pentenol; 2-(Z)-pentenol; 2Z-Penten-1-ol; CIS-2-PENTENOL; QNC2NB53MJ; (E)-2-Penten-1-ol; Pent-2(E)-enol; CHEBI:89943; EINECS 216-415-7; Pent-2(Z)-enol; (Z)-Pent-2-enol; cis-2-pentene-1-ol; Z-2-Penten-1-ol; (2Z)-penten-1-ol; cis-2-Penten-1-ol, 95%; (2Z)-2-Penten-1-ol #; CHEMBL2269088; DTXSID30878754; CHEBI:145352; cis-2-Penten-1-ol, >=96%; (2Z)-PENT-2-EN-1-OL; ZINC5224689; LMFA05000110; MFCD00063208; AKOS015969208; cis-2-Penten-1-ol, >=96%, FG; P1199; J-009438; Q27162125; F1905-7137; cis-2-Penten-1-ol stabilized with 0.1% alpha-tocopherol
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  Formula C5H10O
  Weight 86.13
  Structure Could Not Find 2D Structure
3D Structure Download 2D Structure Download
  InChI InChI=1S/C5H10O/c1-2-3-4-5-6/h3-4,6H,2,5H2,1H3/b4-3-
  InChI Key BTSIZIIPFNVMHF-ARJAWSKDSA-N
  Isomeric SMILES CC/C=C\\CO
  Canonical SMILES CCC=CCO
  External Links PubChem ID 5364919
CAS ID 1576-95-0
NPASS ID NPC250734
CHEMBL ID CHEMBL2269088
  NP Activity Charts   Click to show/hide

 The Content Variation of Natural Product Induced by Different Factor(s)
      Species Name: Arabidopsis thaliana
  Factor Name: T-DNA Knock-Out Treatment [1]
              Species Info Factor Info
               Experiment Detail
In vitro cultivation of Arabidopsis wildtype and mutant plants: Seeds were sterilized according to standard lab routines (EtOH, NaOCl/NaOH) prior to aseptical (in vitro) cultivation in 500 ml screw cap jars on MS medium (4.3 g/l; 50 ml/jar) containing Bacto- and Phytoagar (1:2; 6 g/l) and 30 g/l sucrose. Ten seeds were pipetted into each jar and plants grown for 6 weeks until flowering at a temperature of 20 ℃ under a 16/8 h day/ night regime using fluorescent tubes (Osram Lumilux Plus Eco 36 W). Both Arabidopsis thaliana wildtype plants of ecotype Columbia-0 (Col) and 4 Col-derived T-DNA knock-out mutants (homozygous lines) showing deficiencies in the GLS biosynthesis pathway were used in this study (five parallels for wildtype and mutants): TGG1 (Atg526000; Salk_130469), TGG2 (At5g25980; Salk_038730), Cyp83A1 (At4g13770) and Cyp83B1 (At4g31500; Salk_028573). Greenhouse-cultivation of Arabidopsis ecotypes: The following Arabidopsis ecotypes were used in the study: Columbia (Col), Cape Verde Islands (Cvi), Landsberg erecta (Ler) and Wassilewskija (Ws). Single plants were greenhouse-cultivated on fertilized soil (P-Jord; Emmaljunga Torvmull AB) in plug trays (9 × 6 cells) at a temperature of 20 ℃ (three parallels for each ecotype). Due to the 6-weeks growth period (November/December 2003), the plants were cultivated under a 16/8 h day/night regime using metal halide lamps (Osram HQI-T 400 W) placed 130 cm above the trays. Depending on the ecotypical plant development, whole plants were sampled after 3-4 weeks right before bolting for in vivo studies, while investigations of single plant organs (leaf, stem, inflorescence) were carried out after 5-6 weeks of cultivation.
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               Factor Function
Metabolites from methionine, leucine and phenylalanine-derived glucosinolates were most abundant (4-methylthiobutyl, 4-methylpentyl, 2-phenylethyl). In addition, 24 monoterpenes, 26 sesquiterpenes and 12 aromatic structures, predominantly observed in inflorescenses, are described. Excluding the vast group of straight chain aliphatic structures, a total of 102 volatile compounds were detected, of which 59 are reported in Arabidopsis thaliana for the first time, thus emphasizing the sensitivity and applicability of solid-phase microextraction for volatile profiling of plant secondary metabolites.
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               Factor Part Location NP Content
 
A. thaliana T-DNA knock-out mutant Cyp83A1: (At4g13770)
Whole plant Norway
NP Content: 0.64 %
 
A. thaliana T-DNA knock-out mutant Cyp83B: (At4g31500; Salk_028573)
Whole plant Norway
NP Content: 0.65 %
 
A. thaliana T-DNA knock-out mutant TGG1: (Atg526000; Salk_130469)
Whole plant Norway
NP Content: 0.77 %
 
A. thaliana T-DNA knock-out mutant TGG2: (At5g25980; Salk_038730)
Whole plant Norway
NP Content: 1.26 %
References
1 Volatile profiling of Arabidopsis thaliana - Putative olfactory compounds in plant communication