| General Information of Natural Product (ID: NP1597) | |||||||
|---|---|---|---|---|---|---|---|
| Natural Product Name |
Chitinase
|
||||||
| The Content Variation of Natural Product Induced by Different Factor(s) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Species Name: Nocardiopsis lucentensis strain mhce0814 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 4.32±0.03 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Rhodococcus rhodochrous strain mhcr0825 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 0.91±0.01 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces cellulosae strain mhcr0816 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 4.60±0.01 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces cheonanensis strain mhcr0824 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 4.53±0.03 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces lomondensis strain mhcr0810 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 3.20±0.02 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain AB131-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 14.5 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain AB131-2 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 11.5 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain AB131-3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 16 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain AMbr-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 19.5 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain DImp6-1 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 21 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain LBr02 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 17 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain LSW05 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 19.5 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces sp. strain PS4-16 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Chitin agar medium | [2] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Seven endophytic Streptomyces spp. (AImp 6-1, AMbr-1, AFat-1, AB131-1, AB131-2, AB131-3, and DImp6-1) and three Streptomyces spp. isolates obtained from the collections of the Microbiology Laboratory, Bogor Agricultural University (PS4-16, LBR02, and LSW05) were used in this study. Chitinase production was determined using the methods described by Taechowisan et al. An agar disc of each isolate obtained from a 7-day-old culture grown on yeast malt extract medium was placed on a Petri dish containing chitin agar medium (20 g colloidal chitin; 0.1 g K2HPO4 ; 0.1 g MgSO4.7H2O; 1 g NaCl; 2.5 g(NH4)2SO4; 1 g yeast extract; 20 g agar and 1000 ml distilled water). Petri dishes were incubated at 30 ℃ for 6 days. Observations were conducted by measuring the clear zone around the colony (halo) which indicated chitin solubilization by chitinase producing bacteria.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Chitin agar medium (30℃ + 6 days)
|
NA | NA |
NP Content: 14 mm
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces tricolor strain mhce0811 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 6.23±0.02 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Species Name: Streptomyces werraensis strain mhcr0817 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor Name: Minimal medium | [1] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experiment Detail |
Rhizospheric soil samples and roots from 3-month-old Triticum aestivum (wheat var. Lokwan) plants (five plants each from ten fields) grown in the Mehsana region of Gujarat, India (latitude 23° 42′ N and longitude 72° 33′ E), were collected in sterile polyvinyl bags separately by following the composite sampling method and transported under ice-cold conditions. The cultures that inhibited fungal growth were quantified for chitinase production on minimal medium containing (20 g/L) colloidal chitin (Hsu & Lockwood, 1975). The organic acid responsible for the phosphate solubilization of the two most effective solubilizers was determined as follows. The cultures were grown on minimal medium [0.2 g (NH4)2SO4 /L, 0.06 g MgSO4.7H2O /L, 50 g PEG 6000 /L] supplemented with glucose (20 g/L), 1 ml trace salts solution (1.0 g ZnSO4.7H20 /L, 1.0 g MnCl2.4H2O /L, 1.0 g CaCl2 /L) for 7 days.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mechanism |
The gene expression of IDH, ICL and MS was monitored using specifically designed primers during the exponential phase (third day) and the malate-producing stationary phase (seventh day). The qRT-PCR analysis showed no significant change in IDH expression during the malate-producing stationary phase (seventh day) in either mhcr0816 or mhce0811, as compared to the growth phase (third day). A several fold increase in expression of ICL and MS in the stationary phase of mhcr0816 correlated with high malate production (50-55 mM, pH 2.9) and phosphate solubilization (1916 mg/L). Expression of ICL and MS in mhce0811 did not alter drastically during the acid-production phase; The enzymes assays correlated with the gene expression studies of IDH, ICL and MS in both the test (mhcr0816) and control (mhce0811) isolates. The IDH activity lacked significant alteration in both the cultures before (third day) and during acid production (seventh day). However, significantly elevated level of ICL (fourfold) and MS (tenfold) explained the malic acid overproduction and high phosphate solubilization in mhcr0816 as compared to mhce0811.
Click to Show/Hide
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Factor | Part | Location | NP Content | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Minimal medium containing (20 g/l) colloidal chitin
|
Rhizospheric soil samples and roots | Mehsana region of Gujarat, India |
NP Content: 0.62±0.04 U/ml
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||